Whole genome sequence data of Pediococcus pentosaceus NIBL1955 isolated from rice

초록

Whole-genome sequencing was performed on Pediococcus pentosaceus NIBL1955 isolated from rice. The genome consisted of one chromosome and three plasmids, with a total size of 1,958,539 bp. It contained 1,887 predicted proteincoding genes, 15 rRNA genes, and 56 tRNA genes. Average nucleotide identities analysis showed that P. pentosaceus NIBL1955 shared over 98% identity with other P. pentosaceus strains. The annotated genes of P. pentosaceus NIBL1955 were classified into clusters of orthologous group categories, with the majority assigned to function unknown (S: 26.2%) or general function prediction only (R: 8.9%), followed by genes involved in carbohydrate transport and metabolism (G: 8.7%). Orthologous protein cluster analysis identified 1,400 clusters shared among the five P. pentosaceus strains. P. pentosaceus NIBL1955 possessed only one unique cluster and 135 singleton proteins, thereby indicating a high degree of proteomic similarity with other strains. This dataset provides genomic information on P. pentosaceus NIBL1955, which enables further molecular studies and comparative genomic analyses. (c) 2025 Published by Elsevier Inc. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/ )

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