The complete chloroplast genome sequence of Codonopsis minima (Campanulaceae), an endemic to Korea

  • Cheon, Kyeong-Sik; 
  • Kim, Kyung-Ah; 
  • Han, Jun-Soo; 
  • Yoo, Ki-Oug
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초록

The complete chloroplast genome sequence of Codonopsis minima, an endemic species to Korea, was determined by Illumina pair-end sequencing. The complete plastid genome was 169,321 bp in length, containing a large single copy (LSC) of 85,506 bp and a small single copy (SSC) of 8065 bp, which were separated by a pair of 37,875 bp inverted repeats (IRs). A total of 108 unique genes were annotated, including 75 protein coding genes, 29 tRNA genes, and 4 rRNA genes. Among these genes, 16 genes contained one or two introns. The overall GC contents of the plastid genome were 38.3%. A maximum likelihood phylogenetic analysis showed that C. minima formed the most basal part within the Campanulaceae s. str. clade with a high support value (BS = 100), which was identified as sister to all other taxa in the clade.

키워드

Campanulaceae; Codonopsis; Jeju-do Island; Chloroplast genome; Endemic species
제목
The complete chloroplast genome sequence of Codonopsis minima (Campanulaceae), an endemic to Korea
저자
Cheon, Kyeong-Sik; Kim, Kyung-Ah; Han, Jun-Soo; Yoo, Ki-Oug
DOI
10.1007/s12686-017-0718-0
발행일
2017-12
유형
Article
저널명
Conservation Genetics Resources
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9
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4
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541 ~ 543